TSS: Hg 100934.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=ENST00000377044.8:0 NM_013390:0 NM_001135820:0 uc011lsa.1:0 AK056807:337 ENST00000543165.1:371 uc064trx.1:371 AK300405:371 AF137030:392 AB037833:407 BC146780:407 ENST00000377066.9:498 ENST00000542935.5:498 uc010mos.3:498 uc064trr.1:498 BC140773:498 BC144510:498 BC171782:498
|all_trans=AK056807:337 ENST00000377044.9:371 ENST00000543165.1:371 NM_001349784:371 NM_013390:371 NM_001135820:371 AK300405:371 AF137030:392 AB037833:407 BC146780:407 ENST00000377066.9:498 ENST00000542935.5:498 BC140773:498 BC144510:498 BC171782:498
|chr=chr9
|chr=chr9
|cpg_percent=0.115
|cpg_percent=0.115
|distance=0
|distance=337
|distance_to_tss=-9
|distance_to_tss=-380
|end=71768902
|end=71768902
|end_of_center_position=71768893
|end_of_center_position=71768893
|entrez_id=23670
|entrez_id=23670
|gc_percent=0.766169
|gc_percent=0.766169
|gene_alias=-
|gene_alias=TMEM2
|gene_description=transmembrane protein 2
|gene_description=cell migration inducing hyaluronidase 2
|gene_id=23670
|gene_id=23670
|gene_name=transmembrane protein 2
|gene_name=CEMIP2
|gene_source=HGNC:11869
|gene_source=HGNC:11869
|gene_symbol=TMEM2
|gene_symbol=TMEM2
Line 22: Line 22:
|nearest_refseq=NM_013390
|nearest_refseq=NM_013390
|nearest_unigene=Hs.494146
|nearest_unigene=Hs.494146
|num_trans=18
|num_trans=15
|species=human
|species=human
|start=71768883
|start=71768883
|start_of_center_position=71768892
|start_of_center_position=71768892
|strand=-
|strand=-
|transcript_name=ENST00000377044.8 NM_013390 NM_001135820 uc011lsa.1
|transcript_name=AK056807
|tss_classification=yes
|tss_classification=yes
|tss_id=hg_100934.1
|tss_id=hg_100934.1

Latest revision as of 15:31, 15 June 2021

Basic information about the TSS


TSS ID:hg_100934.1
Species:human
Chr:chr9
Start:71768883
End:71768902
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:AK056807
Distance:337
GeneID:23670
HGNC/MGI_ID:HGNC:11869
UniProt_ID:A0A024R229 Q9UHN6
Gene_name:CEMIP2
Gene_symbol:TMEM2
Gene_synonyms:
Gene_source:HGNC:11869



TATA-Box annotation


Distance to TSS:-380
Nearest PromoterID:NM_013390
Entrez ID:23670
Nearest Unigene:Hs.494146
Nearest Refseq:NM_013390
Nearest Ensembl:ENSG00000135048
Gene Name:CEMIP2
Gene Alias:TMEM2
Gene Description:cell migration inducing hyaluronidase 2
Gene Type:protein-coding
CpG%:0.115
GC%:0.766169
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.