TSS: Hg 100944.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-351 | |distance_to_tss=-351 | ||
|end=72305090 | |end=72305090 | ||
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|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl=ENSG00000225434 | |nearest_ensembl=ENSG00000225434 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_110953 | ||
|nearest_refseq=NR_110952 | |nearest_refseq=NR_110952 | ||
|nearest_unigene=Hs.54957 | |nearest_unigene=Hs.54957 | ||
| Line 21: | Line 21: | ||
|start_of_center_position=72305085 | |start_of_center_position=72305085 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-76(CCTTATCTACCC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 15:31, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -351 |
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| Nearest PromoterID: | NR_110953 |
| Entrez ID: | 100507540 |
| Nearest Unigene: | Hs.54957 |
| Nearest Refseq: | NR_110952 |
| Nearest Ensembl: | ENSG00000225434 |
| Gene Name: | LINC01504 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1504 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -76(CCTTATCTACCC,+,0.00) |