TSS: Hg 10100.1: Difference between revisions
From referenceTSS
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|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |distance=NA | ||
|distance_to_tss=-13646 | |distance_to_tss=-13646 | ||
|end=8195029 | |end=8195029 | ||
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|start_of_center_position=8195026 | |start_of_center_position=8195026 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-57(AGCTATTTAGGG,-,0.00),81(GGTTCTAAAAAG,-,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 15:33, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -13646 |
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| Nearest PromoterID: | NR_125998 |
| Entrez ID: | 102724539 |
| Nearest Unigene: | Hs.516816 |
| Nearest Refseq: | NR_125998 |
| Nearest Ensembl: | ENSG00000227634 |
| Gene Name: | LINC01714 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1714 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -57(AGCTATTTAGGG,-,0.00),81(GGTTCTAAAAAG,-,0.00) |