TSS: Hg 101022.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=KJ894122:-45 BC039588:-253 AK225349:-283 | |all_trans=KJ894122:-45 BC039588:-253 AK225349:-283 AK000972:-319 ENST00000376854.6:-345 NM_017998:-345 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=-45 | |distance=-45 | ||
|distance_to_tss= | |distance_to_tss=358 | ||
|end=74952567 | |end=74952567 | ||
|end_of_center_position=74952555 | |end_of_center_position=74952555 | ||
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|nearest_refseq=NM_017998 | |nearest_refseq=NM_017998 | ||
|nearest_unigene=Hs.532296 | |nearest_unigene=Hs.532296 | ||
|num_trans= | |num_trans=6 | ||
|species=human | |species=human | ||
|start=74952541 | |start=74952541 | ||
Latest revision as of 15:33, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 358 |
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| Nearest PromoterID: | NM_017998 |
| Entrez ID: | 55071 |
| Nearest Unigene: | Hs.532296 |
| Nearest Refseq: | NM_017998 |
| Nearest Ensembl: | ENSG00000135045 |
| Gene Name: | C9orf40 |
| Gene Alias: | - |
| Gene Description: | chromosome 9 open reading frame 40 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |