TSS: Hg 101026.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF345149:35 MA580726:35 LF377869:37 MA613446:37 LF377868:132 MA613445:132 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=35 | ||
|distance_to_tss=29055 | |distance_to_tss=29055 | ||
|end=74982022 | |end=74982022 | ||
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|entrez_id=101927380 | |entrez_id=101927380 | ||
|gc_percent=0.318408 | |gc_percent=0.318408 | ||
|gene_alias=- | |gene_alias=C9orf41-AS1 | ||
|gene_description= | |gene_description=CARNMT1 antisense RNA 1 | ||
|gene_name= | |gene_name=CARNMT1-AS1 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl= | ||
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|nearest_refseq=NR_121183 | |nearest_refseq=NR_121183 | ||
|nearest_unigene=Hs.257556 | |nearest_unigene=Hs.257556 | ||
|num_trans= | |num_trans=6 | ||
|species=human | |species=human | ||
|start=74982017 | |start=74982017 | ||
|start_of_center_position=74982019 | |start_of_center_position=74982019 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF345149 MA580726 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101026.1 | |tss_id=hg_101026.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 15:33, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 29055 |
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| Nearest PromoterID: | NR_121183 |
| Entrez ID: | 101927380 |
| Nearest Unigene: | Hs.257556 |
| Nearest Refseq: | NR_121183 |
| Nearest Ensembl: | |
| Gene Name: | CARNMT1-AS1 |
| Gene Alias: | C9orf41-AS1 |
| Gene Description: | CARNMT1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.318408 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |