TSS: Hg 101036.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=BC015473:-58 KJ899117:80 KJ905495:80 BC007069:-130 ENST00000490113.1:141 uc064tug.1:141 ENST00000376736.5:-213 uc004akd.3:-213 AK002011:-213 ENST00000472900.5:-225 ENST00000479197.1:-225 uc064tuj.1:-225 uc064tuk.1:-225 AK315734:-225 AK307079:-225 NM_018339:-236 ENST00000483155.5:316 uc064tuh.1:316
|all_trans=BC015473:-58 KJ899117:80 KJ905495:80 BC007069:-130 ENST00000376736.6:-134 NM_018339:-134 ENST00000490113.1:141 AK002011:-213 ENST00000472900.5:-225 ENST00000479197.1:-225 AK315734:-225 AK307079:-225 ENST00000483155.5:316
|chr=chr9
|chr=chr9
|cpg_percent=0.145
|cpg_percent=0.145
|distance=-58
|distance=-58
|distance_to_tss=246
|distance_to_tss=144
|end=76394292
|end=76394292
|end_of_center_position=76394283
|end_of_center_position=76394283
Line 17: Line 17:
|nearest_refseq=NM_018339
|nearest_refseq=NM_018339
|nearest_unigene=Hs.37558
|nearest_unigene=Hs.37558
|num_trans=18
|num_trans=13
|species=human
|species=human
|start=76394272
|start=76394272

Latest revision as of 15:34, 15 June 2021

Basic information about the TSS

TSS ID:hg_101036.1
Species:human
Chr:chr9
Start:76394272
End:76394292
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:BC015473
Distance:-58
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:RFK
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation

Distance to TSS:144
Nearest PromoterID:NM_018339
Entrez ID:55312
Nearest Unigene:Hs.37558
Nearest Refseq:NM_018339
Nearest Ensembl:ENSG00000135002
Gene Name:RFK
Gene Alias:RIFK
Gene Description:riboflavin kinase
Gene Type:protein-coding
CpG%:0.145
GC%:0.756219
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



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