TSS: Hg 101038.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=BC015473:-9 BC007069:-81 KJ899117:136 KJ905495:136 ENST00000376736.5:-164 uc004akd.3:-164 AK002011:-164 ENST00000472900.5:-176 ENST00000479197.1:-176 uc064tuj.1:-176 uc064tuk.1:-176 AK315734:-176 AK307079:-176 NM_018339:-187 ENST00000490113.1:197 uc064tug.1:197 ENST00000483155.5:372 uc064tuh.1:372
|all_trans=BC015473:-9 BC007069:-81 ENST00000376736.6:-85 NM_018339:-85 KJ899117:136 KJ905495:136 AK002011:-164 ENST00000472900.5:-176 ENST00000479197.1:-176 AK315734:-176 AK307079:-176 ENST00000490113.1:197 ENST00000483155.5:372
|chr=chr9
|chr=chr9
|cpg_percent=0.125
|cpg_percent=0.125
|distance=-9
|distance=-9
|distance_to_tss=193
|distance_to_tss=91
|end=76394341
|end=76394341
|end_of_center_position=76394335
|end_of_center_position=76394335
Line 17: Line 17:
|nearest_refseq=NM_018339
|nearest_refseq=NM_018339
|nearest_unigene=Hs.37558
|nearest_unigene=Hs.37558
|num_trans=18
|num_trans=13
|species=human
|species=human
|start=76394328
|start=76394328

Latest revision as of 15:34, 15 June 2021

Basic information about the TSS

TSS ID:hg_101038.1
Species:human
Chr:chr9
Start:76394328
End:76394341
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:BC015473
Distance:-9
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:RFK
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation

Distance to TSS:91
Nearest PromoterID:NM_018339
Entrez ID:55312
Nearest Unigene:Hs.37558
Nearest Refseq:NM_018339
Nearest Ensembl:ENSG00000135002
Gene Name:RFK
Gene Alias:RIFK
Gene Description:riboflavin kinase
Gene Type:protein-coding
CpG%:0.125
GC%:0.726368
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



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