TSS: Hg 101146.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF331818:27 MA567395:27 LF331817:129 MA567394:129 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=27 | ||
|distance_to_tss=-27838 | |distance_to_tss=-27838 | ||
|end=83680005 | |end=83680005 | ||
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|nearest_refseq=NR_135839 | |nearest_refseq=NR_135839 | ||
|nearest_unigene=Hs.9589 | |nearest_unigene=Hs.9589 | ||
|num_trans= | |num_trans=4 | ||
|species=human | |species=human | ||
|start=83679989 | |start=83679989 | ||
|start_of_center_position=83679997 | |start_of_center_position=83679997 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF331818 MA567395 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101146.1 | |tss_id=hg_101146.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:33, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -27838 |
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| Nearest PromoterID: | NR_135839 |
| Entrez ID: | 105376114 |
| Nearest Unigene: | Hs.9589 |
| Nearest Refseq: | NR_135839 |
| Nearest Ensembl: | ENSG00000254473 |
| Gene Name: | LOC105376114 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC105376114 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |