TSS: Hg 101340.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000667748.1:-305 | |||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=-305 | ||
|distance_to_tss=73803 | |distance_to_tss=73803 | ||
|end=90508955 | |end=90508955 | ||
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|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 1501 | |gene_description=long intergenic non-protein coding RNA 1501 | ||
|gene_name=LINC01501 | |gene_id= | ||
|gene_name=long intergenic non-protein coding RNA 1501 | |||
|gene_source=HGNC:27988 | |||
|gene_symbol=LINC01501 | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:27988 | |||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_034157 | |nearest_promoter_id=NR_034157 | ||
|nearest_refseq=NM_001105317 | |nearest_refseq=NM_001105317 | ||
|nearest_unigene=Hs.522284 | |nearest_unigene=Hs.522284 | ||
|num_trans= | |num_trans=1 | ||
|species=human | |species=human | ||
|start=90508930 | |start=90508930 | ||
|start_of_center_position=90508942 | |start_of_center_position=90508942 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENST00000667748.1 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101340.1 | |tss_id=hg_101340.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} |
Revision as of 16:37, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 73803 |
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Nearest PromoterID: | NR_034157 |
Entrez ID: | 340515 |
Nearest Unigene: | Hs.522284 |
Nearest Refseq: | NM_001105317 |
Nearest Ensembl: | |
Gene Name: | long intergenic non-protein coding RNA 1501 |
Gene Alias: | - |
Gene Description: | long intergenic non-protein coding RNA 1501 |
Gene Type: | ncRNA |
CpG%: | 0 |
GC%: | 0.482587 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.