TSS: Hg 101499.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=DQ599685:-189 BC160143:213 AK309269:-216 DQ579422:242 ENST00000483149.6:-319 ENST00000520470 | |all_trans=DQ599685:-189 BC160143:213 AK309269:-216 DQ579422:242 ENST00000483149.6:-319 ENST00000520470.5:-319 BC107135:-319 BC107136:-319 BC113074:-319 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=-189 | |distance=-189 | ||
|distance_to_tss= | |distance_to_tss=651 | ||
|end=93452938 | |end=93452938 | ||
|end_of_center_position=93452930 | |end_of_center_position=93452930 | ||
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|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000188938 | |nearest_ensembl=ENSG00000188938 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_136231 | ||
|nearest_refseq=NM_198841 | |nearest_refseq=NM_198841 | ||
|nearest_unigene=Hs.350364 | |nearest_unigene=Hs.350364 | ||
|num_trans= | |num_trans=9 | ||
|species=human | |species=human | ||
|start=93452921 | |start=93452921 | ||
Latest revision as of 16:41, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 651 |
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| Nearest PromoterID: | NR_136231 |
| Entrez ID: | 158293 |
| Nearest Unigene: | Hs.350364 |
| Nearest Refseq: | NM_198841 |
| Nearest Ensembl: | ENSG00000188938 |
| Gene Name: | FAM120AOS |
| Gene Alias: | C9orf10OS |
| Gene Description: | family with sequence similarity 120A opposite strand |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |