TSS: Hg 101533.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=23181 | ||
|end=94922377 | |end=94922377 | ||
|end_of_center_position=94922373 | |end_of_center_position=94922373 | ||
|entrez_id= | |entrez_id=101928119 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias= | |gene_alias=- | ||
|gene_description= | |gene_description=uncharacterized LOC101928119 | ||
|gene_name= | |gene_name=LOC101928119 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_147614 | ||
|nearest_refseq= | |nearest_refseq=NR_147613 | ||
|nearest_unigene= | |nearest_unigene=Hs.630906 | ||
|num_trans=0 | |num_trans=0 | ||
|species=human | |species=human | ||
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|start_of_center_position=94922372 | |start_of_center_position=94922372 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-35(GGCCTTATAAAC,-,0.00),-33(CCTTATAAACAG,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:42, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 23181 |
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| Nearest PromoterID: | NR_147614 |
| Entrez ID: | 101928119 |
| Nearest Unigene: | Hs.630906 |
| Nearest Refseq: | NR_147613 |
| Nearest Ensembl: | |
| Gene Name: | LOC101928119 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928119 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(GGCCTTATAAAC,-,0.00),-33(CCTTATAAACAG,+,0.00) |