TSS: Hg 101615.1: Difference between revisions
From referenceTSS
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|CTSL2= | |CTSL2= | ||
|CTSU= | |CTSU= | ||
|all_trans= | |all_trans=ENST00000259470.6:0 ENST00000681927.1:0 ENST00000680385.1:0 ENST00000680221.1:0 ENST00000681737.1:0 ENST00000680435.1:0 ENST00000680787.1:0 ENST00000681330.1:0 ENST00000479932.2:0 NM_001333:0 AB001928:0 AK310740:0 AK310645:0 Y14734:7 BC023504:9 ENST00000680159.1:-24 BC110512:-29 ENST00000538255.6:31 AF070448:49 AY358641:-160 NM_001201575:-493 LF384931:-493 MA620508:-493 AK312806:-493 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=1 | ||
|end=97039150 | |end=97039150 | ||
|end_of_center_position=97039142 | |end_of_center_position=97039142 | ||
|entrez_id=1515 | |entrez_id=1515 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=CATL2 | |gene_alias=CATL2{{!}}CTSL2{{!}}CTSU | ||
|gene_description=cathepsin V | |gene_description=cathepsin V | ||
|gene_id=1515 | |gene_id=1515 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_001333 | |nearest_refseq=NM_001333 | ||
|nearest_unigene=Hs.610096 | |nearest_unigene=Hs.610096 | ||
|num_trans= | |num_trans=24 | ||
|species=human | |species=human | ||
|start=97039132 | |start=97039132 | ||
|start_of_center_position=97039141 | |start_of_center_position=97039141 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENST00000259470.6 ENST00000681927.1 ENST00000680385.1 ENST00000680221.1 ENST00000681737.1 ENST00000680435.1 ENST00000680787.1 ENST00000681330.1 ENST00000479932.2 NM_001333 AB001928 AK310740 AK310645 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101615.1 | |tss_id=hg_101615.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=A0A024R141 O60911 | ||
}} | }} | ||
Revision as of 16:44, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1 |
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| Nearest PromoterID: | NM_001333 |
| Entrez ID: | 1515 |
| Nearest Unigene: | Hs.610096 |
| Nearest Refseq: | NM_001333 |
| Nearest Ensembl: | ENSG00000136943 |
| Gene Name: | cathepsin V |
| Gene Alias: | CATL2|CTSL2|CTSU |
| Gene Description: | cathepsin V |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.