TSS: Hg 101829.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=NA | ||
|distance_to_tss=10495 | |distance_to_tss=10495 | ||
|end=105458530 | |end=105458530 | ||
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|entrez_id=83856 | |entrez_id=83856 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
|gene_alias=CCDC10 | |gene_alias=CCDC10{{!}}CSDUFD1{{!}}FSD1CL{{!}}FSD1NL{{!}}MIR1 | ||
|gene_description=fibronectin type III and SPRY domain containing 1 like | |gene_description=fibronectin type III and SPRY domain containing 1 like | ||
|gene_name=FSD1L | |gene_name=FSD1L | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000106701 | |nearest_ensembl=ENSG00000106701 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001287192 | ||
|nearest_refseq=NM_031919 | |nearest_refseq=NM_031919 | ||
|nearest_unigene=Hs.136901 | |nearest_unigene=Hs.136901 | ||
| Line 25: | Line 25: | ||
|start_of_center_position=105458528 | |start_of_center_position=105458528 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-32(GCCCATAAAAAC,-,0.00),-30(CCATAAAAACCC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:49, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 10495 |
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| Nearest PromoterID: | NM_001287192 |
| Entrez ID: | 83856 |
| Nearest Unigene: | Hs.136901 |
| Nearest Refseq: | NM_031919 |
| Nearest Ensembl: | ENSG00000106701 |
| Gene Name: | FSD1L |
| Gene Alias: | CCDC10|CSDUFD1|FSD1CL|FSD1NL|MIR1 |
| Gene Description: | fibronectin type III and SPRY domain containing 1 like |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -32(GCCCATAAAAAC,-,0.00),-30(CCATAAAAACCC,+,0.00) |