TSS: Hg 101910.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000449258 | |all_trans=ENST00000449258.1:227 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=227 | |distance=227 | ||
|distance_to_tss=- | |distance_to_tss=-7925 | ||
|end=109772276 | |end=109772276 | ||
|end_of_center_position=109772273 | |end_of_center_position=109772273 | ||
|entrez_id= | |entrez_id=445815 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=AKAP2 | |gene_alias=AKAP-2{{!}}AKAP-KL{{!}}AKAP2{{!}}AKAPKL{{!}}MISP2{{!}}PALM2{{!}}PRKA2 | ||
|gene_description= | |gene_description=PALM2-AKAP2 fusion | ||
|gene_name= | |gene_id=107987013 | ||
|gene_name=putative uncharacterized protein DDB_G0287265 | |||
|gene_source=EntrezGene:107987013 | |||
|gene_symbol=LOC107987013 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id= | |||
|nearest_ensembl=ENSG00000157654 | |nearest_ensembl=ENSG00000157654 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_147150 | ||
|nearest_refseq= | |nearest_refseq=NM_007203 | ||
|nearest_unigene=Hs.591908 | |nearest_unigene=Hs.591908 | ||
|num_trans= | |num_trans=1 | ||
|species=human | |species=human | ||
|start=109772269 | |start=109772269 | ||
|start_of_center_position=109772272 | |start_of_center_position=109772272 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000449258 | |transcript_name=ENST00000449258.1 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101910.1 | |tss_id=hg_101910.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Revision as of 16:51, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -7925 |
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| Nearest PromoterID: | NM_147150 |
| Entrez ID: | 445815 |
| Nearest Unigene: | Hs.591908 |
| Nearest Refseq: | NM_007203 |
| Nearest Ensembl: | ENSG00000157654 |
| Gene Name: | putative uncharacterized protein DDB_G0287265 |
| Gene Alias: | AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2 |
| Gene Description: | PALM2-AKAP2 fusion |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.