TSS: Hg 102176.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |distance=NA | ||
|distance_to_tss=6203 | |distance_to_tss=6203 | ||
|end=114786332 | |end=114786332 | ||
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|entrez_id=9966 | |entrez_id=9966 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
|gene_alias=TL1 | |gene_alias=TL1{{!}}TL1A{{!}}TNLG1B{{!}}VEGI{{!}}VEGI192A | ||
|gene_description= | |gene_description=TNF superfamily member 15 | ||
|gene_name=TNFSF15 | |gene_name=TNFSF15 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 25: | Line 25: | ||
|start_of_center_position=114786326 | |start_of_center_position=114786326 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=34(TACCTTAAAAAC,-,0.00),36(CCTTAAAAACAC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 16:57, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 6203 |
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| Nearest PromoterID: | NM_001204344 |
| Entrez ID: | 9966 |
| Nearest Unigene: | Hs.23349 |
| Nearest Refseq: | NM_005118 |
| Nearest Ensembl: | ENSG00000181634 |
| Gene Name: | TNFSF15 |
| Gene Alias: | TL1|TL1A|TNLG1B|VEGI|VEGI192A |
| Gene Description: | TNF superfamily member 15 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 34(TACCTTAAAAAC,-,0.00),36(CCTTAAAAACAC,+,0.00) |