TSS: Hg 10233.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=LF206735:0 MA442312:0 LF357458:5 MA593035:5 LF357459:74 MA593036:74 LF357460:246 MA593037:246 | |||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance= | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=39236 | ||
|end=9730716 | |end=9730716 | ||
|end_of_center_position=9730704 | |end_of_center_position=9730704 | ||
|entrez_id= | |entrez_id=5293 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias= | |gene_alias=APDS{{!}}IMD14{{!}}P110DELTA{{!}}PI3K{{!}}p110D | ||
|gene_description= | |gene_description=phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta | ||
|gene_name=PIK3CD | |gene_name=PIK3CD | ||
|gene_type= | |gene_type=protein-coding | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000171608 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001350235 | ||
|nearest_refseq= | |nearest_refseq=NM_005026 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.518451 | ||
|num_trans= | |num_trans=8 | ||
|species=human | |species=human | ||
|start=9730690 | |start=9730690 | ||
|start_of_center_position=9730703 | |start_of_center_position=9730703 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF206735 MA442312 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10233.1 | |tss_id=hg_10233.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:01, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 39236 |
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| Nearest PromoterID: | NM_001350235 |
| Entrez ID: | 5293 |
| Nearest Unigene: | Hs.518451 |
| Nearest Refseq: | NM_005026 |
| Nearest Ensembl: | ENSG00000171608 |
| Gene Name: | PIK3CD |
| Gene Alias: | APDS|IMD14|P110DELTA|PI3K|p110D |
| Gene Description: | phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |