TSS: Hg 102417.1: Difference between revisions
From referenceTSS
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|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=NA | ||
|distance_to_tss= | |distance_to_tss=81899 | ||
|end=123848228 | |end=123848228 | ||
|end_of_center_position=123848227 | |end_of_center_position=123848227 | ||
|entrez_id=57706 | |entrez_id=57706 | ||
|gc_percent=0.278607 | |gc_percent=0.278607 | ||
|gene_alias=FAM31A | |gene_alias=FAM31A{{!}}KIAA1608 | ||
|gene_description=DENN domain containing 1A | |gene_description=DENN domain containing 1A | ||
|gene_name=DENND1A | |gene_name=DENND1A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000119522 | |nearest_ensembl=ENSG00000119522 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_024820 | ||
|nearest_refseq=NM_020946 | |nearest_refseq=NM_020946 | ||
|nearest_unigene=Hs.744995 | |nearest_unigene=Hs.744995 | ||
| Line 22: | Line 22: | ||
|start_of_center_position=123848226 | |start_of_center_position=123848226 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-7(TTTTTTAAAGCA,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 17:03, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 81899 |
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| Nearest PromoterID: | NM_024820 |
| Entrez ID: | 57706 |
| Nearest Unigene: | Hs.744995 |
| Nearest Refseq: | NM_020946 |
| Nearest Ensembl: | ENSG00000119522 |
| Gene Name: | DENND1A |
| Gene Alias: | FAM31A|KIAA1608 |
| Gene Description: | DENN domain containing 1A |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.278607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -7(TTTTTTAAAGCA,+,0.00) |