TSS: Hg 102689.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=AY882313:-228 LG005857:-228 LG053553:-228 LG051691:-289 | |all_trans=AY882313:-228 LF137795:-228 LF160925:-228 LF162760:-228 LF953512:-228 LG005857:-228 LG053553:-228 LG240792:-228 LP726741:-228 LP819011:-228 LP938953:-228 LQ070227:-228 LV470877:-228 LY405109:-228 LZ233810:-228 MA260348:-228 MA643728:-228 MA731612:-228 MS673354:-228 MS834405:-228 MS901621:-228 MA800781:-228 MP129567:-228 MP162490:-228 LQ071298:-230 MA644799:-230 MA732683:-230 MA801852:-230 LQ938814:-250 LQ938813:-271 LF714705:-289 LF714892:-289 LF856639:-289 LF856826:-289 LG051691:-289 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
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|entrez_id=100616335 | |entrez_id=100616335 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=MIR2964A | |gene_alias=MIR2964A{{!}}hsa-mir-219b{{!}}mir-219b | ||
|gene_description=microRNA 219b | |gene_description=microRNA 219b | ||
|gene_name=MIR219B | |gene_name=MIR219B | ||
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|nearest_refseq=NR_039815 | |nearest_refseq=NR_039815 | ||
|nearest_unigene= | |nearest_unigene= | ||
|num_trans= | |num_trans=35 | ||
|species=human | |species=human | ||
|start=128392419 | |start=128392419 | ||
|start_of_center_position=128392422 | |start_of_center_position=128392422 | ||
|strand=- | |strand=- | ||
|transcript_name=AY882313 LG005857 LG053553 | |transcript_name=AY882313 LF137795 LF160925 LF162760 LF953512 LG005857 LG053553 LG240792 LP726741 LP819011 LP938953 LQ070227 LV470877 LY405109 LZ233810 MA260348 MA643728 MA731612 MS673354 MS834405 MS901621 MA800781 MP129567 MP162490 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102689.1 | |tss_id=hg_102689.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 17:09, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -199 |
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| Nearest PromoterID: | NR_039815 |
| Entrez ID: | 100616335 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_039815 |
| Nearest Ensembl: | ENSG00000283335 |
| Gene Name: | MIR219B |
| Gene Alias: | MIR2964A|hsa-mir-219b|mir-219b |
| Gene Description: | microRNA 219b |
| Gene Type: | ncRNA |
| CpG%: | 0.125 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |