TSS: Hg 102897.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|TTF-I= | |TTF-I= | ||
|all_trans= | |all_trans=ENST00000334270.3:0 ENST00000612514.4:0 NM_001205296:0 NR_134525:0 NM_007344:0 BC127669:0 BC127670:0 BC143048:0 BC143049:0 AK302902:0 BC143821:0 X83973:0 BC050734:0 AK225119:0 BC062692:0 BC104639:0 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=9 | ||
|end=132406853 | |end=132406853 | ||
|end_of_center_position=132406831 | |end_of_center_position=132406831 | ||
|entrez_id=7270 | |entrez_id=7270 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
|gene_alias=TTF-1 | |gene_alias=TTF-1{{!}}TTF-I | ||
|gene_description=transcription termination factor 1 | |gene_description=transcription termination factor 1 | ||
|gene_id=7270 | |gene_id=7270 | ||
|gene_name= | |gene_name=transcription termination factor 1 | ||
|gene_source=HGNC:12397 | |gene_source=HGNC:12397 | ||
|gene_symbol=TTF1 | |gene_symbol=TTF1 | ||
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|hgnc_mgi_id=HGNC:12397 | |hgnc_mgi_id=HGNC:12397 | ||
|nearest_ensembl=ENSG00000125482 | |nearest_ensembl=ENSG00000125482 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_134525 | ||
|nearest_refseq=NM_007344 | |nearest_refseq=NM_007344 | ||
|nearest_unigene=Hs.54780 | |nearest_unigene=Hs.54780 | ||
|num_trans= | |num_trans=16 | ||
|species=human | |species=human | ||
|start=132406808 | |start=132406808 | ||
|start_of_center_position=132406830 | |start_of_center_position=132406830 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000612514.4 | |transcript_name=ENST00000334270.3 ENST00000612514.4 NM_001205296 NR_134525 NM_007344 BC127669 BC127670 BC143048 BC143049 AK302902 BC143821 X83973 BC050734 AK225119 BC062692 BC104639 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_102897.1 | |tss_id=hg_102897.1 | ||
Revision as of 17:14, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 9 |
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| Nearest PromoterID: | NR_134525 |
| Entrez ID: | 7270 |
| Nearest Unigene: | Hs.54780 |
| Nearest Refseq: | NM_007344 |
| Nearest Ensembl: | ENSG00000125482 |
| Gene Name: | transcription termination factor 1 |
| Gene Alias: | TTF-1|TTF-I |
| Gene Description: | transcription termination factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.