TSS: Hg 10654.1: Difference between revisions
From referenceTSS
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|AFB1-AR1= | |AFB1-AR1= | ||
|AKR7= | |AKR7= | ||
|all_trans=ENST00000235835. | |all_trans=ENST00000235835.8:0 ENST00000330072.9:0 ENST00000492217.1:0 NM_001320979:0 NM_003689:0 LF206692:0 MA442269:0 BC004111:0 BC011586:0 BC013996:0 AF026947:0 AK225267:0 BC007352:0 BC012171:0 EU794591:0 Y16675:0 BC010852:0 AK303131:0 AK310609:0 KJ901887:31 DQ891003:34 DQ894182:34 BT007347:36 ENST00000489286.5:166 LY501480:-296 MA780368:-296 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
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|entrez_id=8574 | |entrez_id=8574 | ||
|gc_percent=0.781095 | |gc_percent=0.781095 | ||
|gene_alias=AFAR | |gene_alias=AFAR{{!}}AFAR1{{!}}AFB1-AR1{{!}}AKR7 | ||
|gene_description=aldo-keto reductase family 7 member A2 | |gene_description=aldo-keto reductase family 7 member A2 | ||
|gene_id=8574 | |gene_id=8574 | ||
|gene_name= | |gene_name=aldo-keto reductase family 7 member A2 | ||
|gene_source=HGNC:389 | |gene_source=HGNC:389 | ||
|gene_symbol=AKR7A2 | |gene_symbol=AKR7A2 | ||
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|hgnc_mgi_id=HGNC:389 | |hgnc_mgi_id=HGNC:389 | ||
|nearest_ensembl=ENSG00000053371 | |nearest_ensembl=ENSG00000053371 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_003689 | ||
|nearest_refseq=NM_003689 | |nearest_refseq=NM_003689 | ||
|nearest_unigene=Hs.571886 | |nearest_unigene=Hs.571886 | ||
|num_trans= | |num_trans=26 | ||
|species=human | |species=human | ||
|start=19312072 | |start=19312072 | ||
|start_of_center_position=19312110 | |start_of_center_position=19312110 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000235835. | |transcript_name=ENST00000235835.8 ENST00000330072.9 ENST00000492217.1 NM_001320979 NM_003689 LF206692 MA442269 BC004111 BC011586 BC013996 AF026947 AK225267 BC007352 BC012171 EU794591 Y16675 BC010852 AK303131 AK310609 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10654.1 | |tss_id=hg_10654.1 | ||
Revision as of 18:40, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 35 |
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| Nearest PromoterID: | NM_003689 |
| Entrez ID: | 8574 |
| Nearest Unigene: | Hs.571886 |
| Nearest Refseq: | NM_003689 |
| Nearest Ensembl: | ENSG00000053371 |
| Gene Name: | aldo-keto reductase family 7 member A2 |
| Gene Alias: | AFAR|AFAR1|AFB1-AR1|AKR7 |
| Gene Description: | aldo-keto reductase family 7 member A2 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.781095 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.