TSS: Hg 112224.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|RNF221= | |RNF221= | ||
|all_trans=AK308541:0 | |all_trans=AK308541:0 ENST00000413872.6:3 ENST00000533464.5:3 BC136615:3 BC144293:3 BC144294:3 BC144295:3 ENST00000534320.5:-9 AB040975:-9 BC146771:-9 BC112931:12 ENST00000416188.3:-25 ENST00000264555.10:-25 NM_001286581:-25 NM_020901:-25 NM_001286583:-25 NM_001286582:-25 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=36 | ||
|end=576518 | |end=576518 | ||
|end_of_center_position=576507 | |end_of_center_position=576507 | ||
|entrez_id=57661 | |entrez_id=57661 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=PPP1R125 | |gene_alias=PPP1R125{{!}}RNF221 | ||
|gene_description=PHD and ring finger domains 1 | |gene_description=PHD and ring finger domains 1 | ||
|gene_name=PHRF1 | |gene_name=PHRF1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000070047 | |nearest_ensembl=ENSG00000070047 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001286581 | ||
|nearest_refseq=NM_020901 | |nearest_refseq=NM_020901 | ||
|nearest_unigene=Hs.325838 | |nearest_unigene=Hs.325838 | ||
|num_trans= | |num_trans=17 | ||
|species=human | |species=human | ||
|start=576494 | |start=576494 | ||
Latest revision as of 20:51, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 36 |
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| Nearest PromoterID: | NM_001286581 |
| Entrez ID: | 57661 |
| Nearest Unigene: | Hs.325838 |
| Nearest Refseq: | NM_020901 |
| Nearest Ensembl: | ENSG00000070047 |
| Gene Name: | PHRF1 |
| Gene Alias: | PPP1R125|RNF221 |
| Gene Description: | PHD and ring finger domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |