TSS: Hg 113006.1: Difference between revisions

Latest revision as of 21:09, 15 June 2021

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

TATA-Box annotation

Distance to TSS:	96
Nearest PromoterID:	NM_001297714
Entrez ID:	23075
Nearest Unigene:	Hs.153026
Nearest Refseq:	NM_015055
Nearest Ensembl:	ENSG00000133789
Gene Name:	SWAP70
Gene Alias:	HSPC321\|SWAP-70
Gene Description:	switching B cell complex subunit SWAP70
Gene Type:	protein-coding
CpG%:	0.075
GC%:	0.706468
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetail
 |SWAP-70=
-|all_trans=KJ893325:1 AB383933:2 CU674300:3 AF210818:4 ENST00000524817.5:-36 uc057yyk.1:-36 BC000134:-36 AK304104:37 AB014540:-46 AF134894:-65 BC000616:-67 ENST00000531814.5:-69 uc057yyj.1:-69 ENST00000526358.5:-90 uc057yyi.1:-90 ENST00000447399.6:-94 ENST00000318950.10:-94 NM_001297714:-94 NM_015055:-94 uc001mhx.4:-94 uc001mhw.4:-94 AK096859:-94
+|all_trans=KJ893325:1 AB383933:2 CU674300:3 AF210818:4 ENST00000524817.5:-36 BC000134:-36 AK304104:37 AB014540:-46 AF134894:-65 BC000616:-67 ENST00000531814.5:-69 ENST00000526358.5:-90 ENST00000447399.6:-94 ENST00000318950.11:-94 NM_015055:-94 NM_001297714:-94 AK096859:-94
 |chr=chr11
 |cpg_percent=0.075
@@ Line 10: / Line 10: @@
 |entrez_id=23075
 |gc_percent=0.706468
-|gene_alias=HSPC321
+|gene_alias=HSPC321{{!}}SWAP-70
-|gene_description=SWAP switching B-cell complex subunit 70
+|gene_description=switching B cell complex subunit SWAP70
 |gene_name=SWAP70
 |gene_type=protein-coding
 |nearest_ensembl=ENSG00000133789
-|nearest_promoter_id=NM_015055
+|nearest_promoter_id=NM_001297714
 |nearest_refseq=NM_015055
 |nearest_unigene=Hs.153026
-|num_trans=22
+|num_trans=17
 |species=human
 |start=9664170