TSS: Hg 118915.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|CSAA= | |CSAA= | ||
|all_trans=M81349:9 AK312182:9 | |all_trans=ENST00000278222.7:0 NM_006512:0 M81349:9 AK312182:9 BC007026:27 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=-2 | ||
|end=18236813 | |end=18236813 | ||
|end_of_center_position=18236805 | |end_of_center_position=18236805 | ||
|entrez_id=6291 | |entrez_id=6291 | ||
|gc_percent=0.427861 | |gc_percent=0.427861 | ||
|gene_alias=C-SAA | |gene_alias=C-SAA{{!}}CSAA | ||
|gene_description= | |gene_description=serum amyloid A4, constitutive | ||
|gene_id=6291 | |gene_id=6291 | ||
|gene_name= | |gene_name=serum amyloid A4, constitutive | ||
|gene_source=HGNC:10516 | |gene_source=HGNC:10516 | ||
|gene_symbol=SAA4 | |gene_symbol=SAA4 | ||
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|nearest_refseq=NM_006512 | |nearest_refseq=NM_006512 | ||
|nearest_unigene=Hs.1955 | |nearest_unigene=Hs.1955 | ||
|num_trans= | |num_trans=5 | ||
|species=human | |species=human | ||
|start=18236795 | |start=18236795 | ||
|start_of_center_position=18236804 | |start_of_center_position=18236804 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENST00000278222.7 NM_006512 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_118915.1 | |tss_id=hg_118915.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=P35542 | ||
}} | }} | ||
Revision as of 23:26, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -2 |
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| Nearest PromoterID: | NM_006512 |
| Entrez ID: | 6291 |
| Nearest Unigene: | Hs.1955 |
| Nearest Refseq: | NM_006512 |
| Nearest Ensembl: | ENSG00000148965 |
| Gene Name: | serum amyloid A4, constitutive |
| Gene Alias: | C-SAA|CSAA |
| Gene Description: | serum amyloid A4, constitutive |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.427861 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.