TSS: Hg 126751.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|RABIN8= | |RABIN8= | ||
|all_trans=BC002556:-6 BC059358:-9 BC014553:-33 ENST00000378815.10 | |all_trans=BC002556:-6 BC059358:-9 BC014553:-33 ENST00000378815.10:-47 ENST00000417413.7:-47 ENST00000483530.6:-47 AK225441:-47 AJ312896:-47 AJ312898:-47 AJ312900:-47 AK026201:-47 ENST00000247833.12:-49 NR_103519:-49 NM_175624:-49 NM_022456:-49 AK314547:-58 ENST00000549760.1:190 NR_103520:462 NM_175625:462 NM_175623:462 ENST00000550536.5:471 ENST00000378809.8:481 ENST00000362025.9:481 ENST00000552199.5:489 AJ312897:489 AJ312899:489 AJ312901:489 | ||
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
|distance=-6 | |distance=-6 | ||
|distance_to_tss= | |distance_to_tss=54 | ||
|end=69738919 | |end=69738919 | ||
|end_of_center_position=69738914 | |end_of_center_position=69738914 | ||
|entrez_id=117177 | |entrez_id=117177 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=RABIN3 | |gene_alias=RABIN3{{!}}RABIN8 | ||
|gene_description=RAB3A interacting protein | |gene_description=RAB3A interacting protein | ||
|gene_name=RAB3IP | |gene_name=RAB3IP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000127328 | |nearest_ensembl=ENSG00000127328 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_103519 | ||
|nearest_refseq=NM_022456 | |nearest_refseq=NM_022456 | ||
|nearest_unigene=Hs.258209 | |nearest_unigene=Hs.258209 | ||
|num_trans= | |num_trans=27 | ||
|species=human | |species=human | ||
|start=69738908 | |start=69738908 | ||
Latest revision as of 02:28, 16 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 54 |
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| Nearest PromoterID: | NR_103519 |
| Entrez ID: | 117177 |
| Nearest Unigene: | Hs.258209 |
| Nearest Refseq: | NM_022456 |
| Nearest Ensembl: | ENSG00000127328 |
| Gene Name: | RAB3IP |
| Gene Alias: | RABIN3|RABIN8 |
| Gene Description: | RAB3A interacting protein |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |