TSS: Hg 143922.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|NY-REN-28= | |NY-REN-28= | ||
|all_trans=ENST00000256379. | |all_trans=ENST00000256379.10:0 ENST00000430055.6:0 ENST00000440435.2:0 ENST00000553611.5:0 ENST00000556044.5:0 ENST00000556495.5:0 ENST00000554870.5:0 ENST00000556423.1:0 NM_005466:0 AK222587:0 LP895303:0 AK300460:0 AK223346:0 AK290647:0 BC004106:0 LF384865:0 MA620442:0 AK304361:0 AF074723:0 U78082:0 AK300417:0 ENST00000554963.5:1 KJ892891:5 ENST00000615788.4:-7 NM_001284211:-7 NM_001284210:-7 NM_001284209:-7 BT006831:7 AB463868:7 CR541697:7 LF329903:265 MA565480:265 | ||
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
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|entrez_id=10001 | |entrez_id=10001 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=ARC33 | |gene_alias=ARC33{{!}}NY-REN-28 | ||
|gene_description=mediator complex subunit 6 | |gene_description=mediator complex subunit 6 | ||
|gene_id=10001 | |gene_id=10001 | ||
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|hgnc_mgi_id=HGNC:19970 | |hgnc_mgi_id=HGNC:19970 | ||
|nearest_ensembl=ENSG00000133997 | |nearest_ensembl=ENSG00000133997 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001284209 | ||
|nearest_refseq=NM_005466 | |nearest_refseq=NM_005466 | ||
|nearest_unigene=Hs.497353 | |nearest_unigene=Hs.497353 | ||
|num_trans= | |num_trans=32 | ||
|species=human | |species=human | ||
|start=70600643 | |start=70600643 | ||
|start_of_center_position=70600663 | |start_of_center_position=70600663 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000256379. | |transcript_name=ENST00000256379.10 ENST00000430055.6 ENST00000440435.2 ENST00000553611.5 ENST00000556044.5 ENST00000556495.5 ENST00000554870.5 ENST00000556423.1 NM_005466 AK222587 LP895303 AK300460 AK223346 AK290647 BC004106 LF384865 MA620442 AK304361 AF074723 U78082 AK300417 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_143922.1 | |tss_id=hg_143922.1 |
Revision as of 09:08, 16 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 27 |
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Nearest PromoterID: | NM_001284209 |
Entrez ID: | 10001 |
Nearest Unigene: | Hs.497353 |
Nearest Refseq: | NM_005466 |
Nearest Ensembl: | ENSG00000133997 |
Gene Name: | mediator complex subunit 6 |
Gene Alias: | ARC33|NY-REN-28 |
Gene Description: | mediator complex subunit 6 |
Gene Type: | protein-coding |
CpG%: | 0.075 |
GC%: | 0.542289 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.