TSS: Hg 151249.1: Difference between revisions
From referenceTSS
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|HsT19294= | |HsT19294= | ||
|RIA1= | |RIA1= | ||
|all_trans=ENST00000359445.7:0 | |all_trans=ENST00000359445.7:0 ENST00000268206.12:0 ENST00000561389.1:0 ENST00000557844.1:0 NM_024580:0 BX538332:0 AK300348:0 AK056656:0 BC014628:10 NM_001040610:-19 NM_001322844:-19 NR_136410:-19 ENST00000650113.1:22 NM_001322845:132 ENST00000558974.1:196 | ||
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=32 | ||
|end=82262744 | |end=82262744 | ||
|end_of_center_position=82262702 | |end_of_center_position=82262702 | ||
|entrez_id=79631 | |entrez_id=79631 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
|gene_alias=EFTUD1 | |gene_alias=EFTUD1{{!}}FAM42A{{!}}HsT19294{{!}}RIA1{{!}}SDS2 | ||
|gene_description=elongation factor like GTPase 1 | |gene_description=elongation factor like GTPase 1 | ||
|gene_id=79631 | |gene_id=79631 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_024580 | |nearest_refseq=NM_024580 | ||
|nearest_unigene=Hs.459114 | |nearest_unigene=Hs.459114 | ||
|num_trans= | |num_trans=15 | ||
|species=human | |species=human | ||
|start=82262659 | |start=82262659 | ||
|start_of_center_position=82262701 | |start_of_center_position=82262701 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000359445.7 ENST00000561389.1 ENST00000557844.1 | |transcript_name=ENST00000359445.7 ENST00000268206.12 ENST00000561389.1 ENST00000557844.1 NM_024580 BX538332 AK300348 AK056656 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_151249.1 | |tss_id=hg_151249.1 | ||
Revision as of 11:57, 16 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 32 |
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| Nearest PromoterID: | NM_024580 |
| Entrez ID: | 79631 |
| Nearest Unigene: | Hs.459114 |
| Nearest Refseq: | NM_024580 |
| Nearest Ensembl: | ENSG00000140598 |
| Gene Name: | elongation factor like GTPase 1 |
| Gene Alias: | EFTUD1|FAM42A|HsT19294|RIA1|SDS2 |
| Gene Description: | elongation factor like GTPase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.