TSS: Hg 152099.1: Difference between revisions
From referenceTSS
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|LP2537= | |LP2537= | ||
|RJD9= | |RJD9= | ||
|all_trans=ENST00000526820.5:0 ENST00000527876.5:0 ENST00000529957.5:0 ENST00000534197.5:0 ENST00000527137.2:0 ENST00000527168.5:0 | |all_trans=ENST00000526820.5:0 ENST00000204679.9:0 ENST00000527876.5:0 ENST00000529957.5:0 ENST00000534197.5:0 ENST00000527137.2:0 ENST00000527168.5:0 NM_032520:0 AK312067:0 BC014592:0 DQ890827:0 DQ893981:0 CU677055:0 KJ903438:0 AF302786:0 AY203933:0 ENST00000529110.1:15 BC131525:137 | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=15 | ||
|end=1351968 | |end=1351968 | ||
|end_of_center_position=1351947 | |end_of_center_position=1351947 | ||
|entrez_id=84572 | |entrez_id=84572 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
|gene_alias=C16orf27 | |gene_alias=C16orf27{{!}}GNPTAG{{!}}LP2537{{!}}RJD9 | ||
|gene_description=N-acetylglucosamine-1-phosphate transferase gamma | |gene_description=N-acetylglucosamine-1-phosphate transferase subunit gamma | ||
|gene_id=84572 | |gene_id=84572 | ||
|gene_name=N-acetylglucosamine-1-phosphate transferase gamma | |gene_name=N-acetylglucosamine-1-phosphate transferase subunit gamma | ||
|gene_source=HGNC:23026 | |gene_source=HGNC:23026 | ||
|gene_symbol=GNPTG | |gene_symbol=GNPTG | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_032520 | |nearest_refseq=NM_032520 | ||
|nearest_unigene=Hs.241575 | |nearest_unigene=Hs.241575 | ||
|num_trans= | |num_trans=18 | ||
|species=human | |species=human | ||
|start=1351924 | |start=1351924 | ||
|start_of_center_position=1351946 | |start_of_center_position=1351946 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000526820.5 ENST00000527876.5 ENST00000529957.5 ENST00000534197.5 ENST00000527137.2 ENST00000527168.5 | |transcript_name=ENST00000526820.5 ENST00000204679.9 ENST00000527876.5 ENST00000529957.5 ENST00000534197.5 ENST00000527137.2 ENST00000527168.5 NM_032520 AK312067 BC014592 DQ890827 DQ893981 CU677055 KJ903438 AF302786 AY203933 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_152099.1 | |tss_id=hg_152099.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A087WWA2 E9PQQ5 | |uniprot_id=A0A087WWA2 E9PQQ5 Q9UJJ9 | ||
}} | }} | ||
Revision as of 12:17, 16 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 15 |
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| Nearest PromoterID: | NM_032520 |
| Entrez ID: | 84572 |
| Nearest Unigene: | Hs.241575 |
| Nearest Refseq: | NM_032520 |
| Nearest Ensembl: | ENSG00000090581 |
| Gene Name: | N-acetylglucosamine-1-phosphate transferase subunit gamma |
| Gene Alias: | C16orf27|GNPTAG|LP2537|RJD9 |
| Gene Description: | N-acetylglucosamine-1-phosphate transferase subunit gamma |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.