TSS: Hg 233729.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=NM_020646:-19 LP895822:-19 ENST00000411148.1:-453 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=-19 | ||
|distance_to_tss= | |distance_to_tss=118104 | ||
|end=8475872 | |end=8475872 | ||
|end_of_center_position=8943014 | |end_of_center_position=8943014 | ||
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|gene_alias=- | |gene_alias=- | ||
|gene_description=serine/threonine kinase 33 | |gene_description=serine/threonine kinase 33 | ||
|gene_id= | |gene_id=56676 | ||
|gene_name= | |gene_name=achaete-scute family bHLH transcription factor 3 | ||
|gene_source=HGNC: | |gene_source=HGNC:740 | ||
|gene_symbol= | |gene_symbol=ASCL3 | ||
|gene_synonyms= | |gene_synonyms=HASH3 Sgn1 bHLHa42 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC: | |hgnc_mgi_id=HGNC:740 | ||
|nearest_ensembl=ENSG00000130413 | |nearest_ensembl=ENSG00000130413 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001352397 | ||
|nearest_refseq=NM_030906 | |nearest_refseq=NM_030906 | ||
|nearest_unigene=Hs.501833 | |nearest_unigene=Hs.501833 | ||
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|start_of_center_position=8943013 | |start_of_center_position=8943013 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=3(TACTTTTAAAGA,-,0.00),4(ACTTTTAAAGAC,+,0.00) | ||
|transcript_name= | |transcript_name=NM_020646 LP895822 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_233729.1 | |tss_id=hg_233729.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=Q9NQ33 | ||
}} | }} | ||
Revision as of 12:54, 17 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 118104 |
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| Nearest PromoterID: | NM_001352397 |
| Entrez ID: | 65975 |
| Nearest Unigene: | Hs.501833 |
| Nearest Refseq: | NM_030906 |
| Nearest Ensembl: | ENSG00000130413 |
| Gene Name: | achaete-scute family bHLH transcription factor 3 |
| Gene Alias: | - |
| Gene Description: | serine/threonine kinase 33 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.293532 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 3(TACTTTTAAAGA,-,0.00),4(ACTTTTAAAGAC,+,0.00) |
TSS expression
Expression data not found.