TSS: Hg 4366.1: Difference between revisions
From referenceTSS
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| Line 3: | Line 3: | ||
|PSP= | |PSP= | ||
|UNC-18C= | |UNC-18C= | ||
|all_trans=ENST00000483586.5:0 | |all_trans=ENST00000483586.5:0 ENST00000370008.4:0 ENST00000469338.1:0 NM_007269:0 LF383828:0 MA619405:0 AK290134:0 AK312910:0 AK291322:0 AK223170:0 D63506:0 LP895150:0 BC047764:0 BC028028:0 BC038099:15 LF353107:20 MA588684:20 AF032922:24 CU690494:29 KJ892225:29 KJ897620:29 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=9 | ||
|end=108746709 | |end=108746709 | ||
|end_of_center_position=108746684 | |end_of_center_position=108746684 | ||
|entrez_id=6814 | |entrez_id=6814 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
|gene_alias=MUNC18-3 | |gene_alias=MUNC18-3{{!}}MUNC18C{{!}}PSP{{!}}UNC-18C | ||
|gene_description=syntaxin binding protein 3 | |gene_description=syntaxin binding protein 3 | ||
|gene_id=6814 | |gene_id=6814 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_007269 | |nearest_refseq=NM_007269 | ||
|nearest_unigene=Hs.530436 | |nearest_unigene=Hs.530436 | ||
|num_trans= | |num_trans=21 | ||
|species=human | |species=human | ||
|start=108746657 | |start=108746657 | ||
|start_of_center_position=108746683 | |start_of_center_position=108746683 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000483586.5 ENST00000469338.1 | |transcript_name=ENST00000483586.5 ENST00000370008.4 ENST00000469338.1 NM_007269 LF383828 MA619405 AK290134 AK312910 AK291322 AK223170 D63506 LP895150 BC047764 BC028028 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_4366.1 | |tss_id=hg_4366.1 | ||
Revision as of 00:24, 18 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 9 |
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| Nearest PromoterID: | NM_007269 |
| Entrez ID: | 6814 |
| Nearest Unigene: | Hs.530436 |
| Nearest Refseq: | NM_007269 |
| Nearest Ensembl: | ENSG00000116266 |
| Gene Name: | syntaxin binding protein 3 |
| Gene Alias: | MUNC18-3|MUNC18C|PSP|UNC-18C |
| Gene Description: | syntaxin binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.