TSS: Hg 63024.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000503010.1:25 | |all_trans=ENST00000456936.4:25 ENST00000503010.1:25 NM_001164468:25 NM_181836:25 AK075218:25 AK304210:25 BC019349:36 ENST00000333314.3:47 AY304583:47 AY304584:47 AK074962:62 ENST00000282382.8:-85 AK027512:-97 NM_001164469:-103 AY304581:269 HQ447119:269 KJ893779:269 CU676434:269 AF151867:374 | ||
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=25 | |distance=25 | ||
|distance_to_tss= | |distance_to_tss=-32 | ||
|end=115626076 | |end=115626076 | ||
|end_of_center_position=115626069 | |end_of_center_position=115626069 | ||
|entrez_id= | |entrez_id=51014 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=- | |gene_alias=CGI-109{{!}}p24g3{{!}}p24gamma3{{!}}p27 | ||
|gene_description= | |gene_description=transmembrane p24 trafficking protein 7 | ||
|gene_id=100302736 51014 | |gene_id=100302736 51014 | ||
|gene_name=TMED7-TICAM2 readthrough; transmembrane p24 trafficking protein 7 | |gene_name=TMED7-TICAM2 readthrough; transmembrane p24 trafficking protein 7 | ||
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|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:24253 HGNC:33945 | |hgnc_mgi_id=HGNC:24253 HGNC:33945 | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000134970 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_181836 | ||
|nearest_refseq= | |nearest_refseq=NM_181836 | ||
|nearest_unigene= | |nearest_unigene=Hs.642817 | ||
|num_trans= | |num_trans=19 | ||
|species=human | |species=human | ||
|start=115626060 | |start=115626060 | ||
|start_of_center_position=115626068 | |start_of_center_position=115626068 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000503010.1 | |transcript_name=ENST00000456936.4 ENST00000503010.1 NM_001164468 NM_181836 AK075218 AK304210 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_63024.1 | |tss_id=hg_63024.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=B4E2C1 | |uniprot_id=B4E2C1 Q86XR7 Q9Y3B3 | ||
}} | }} | ||
Revision as of 07:55, 18 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -32 |
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| Nearest PromoterID: | NM_181836 |
| Entrez ID: | 51014 |
| Nearest Unigene: | Hs.642817 |
| Nearest Refseq: | NM_181836 |
| Nearest Ensembl: | ENSG00000134970 |
| Gene Name: | TMED7-TICAM2 readthrough; transmembrane p24 trafficking protein 7 |
| Gene Alias: | CGI-109|p24g3|p24gamma3|p27 |
| Gene Description: | transmembrane p24 trafficking protein 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.