TSS: Hg 84373.1: Difference between revisions
From referenceTSS
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|PMS5= | |PMS5= | ||
|PMSR3= | |PMSR3= | ||
|all_trans=ENST00000418756.5:0 ENST00000437568.6:0 NR_028059:0 BC046153:0 ENST00000394921.8:15 BC029646:15 ENST00000422064.1:-17 BC014421:83 BC007683:111 ENST00000430602.5:230 BC022886:230 | |all_trans=ENST00000418756.5:0 ENST00000437568.6:0 NR_028059:0 BC046153:0 ENST00000394921.8:15 BC029646:15 ENST00000422064.1:-17 BC014421:83 BC007683:111 ENST00000430602.5:230 BC022886:230 BC087844:349 ENST00000533167.5:487 BC101598:487 BC143635:487 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 12: | Line 12: | ||
|entrez_id=5387 | |entrez_id=5387 | ||
|gc_percent=0.681592 | |gc_percent=0.681592 | ||
|gene_alias=PMS2L3 | |gene_alias=PMS2L3{{!}}PMS2L9{{!}}PMS5{{!}}PMSR3 | ||
|gene_description= | |gene_description=PMS1 homolog 2, mismatch repair system component pseudogene 3 | ||
|gene_id=5387 | |gene_id=5387 | ||
|gene_name= | |gene_name=PMS1 homolog 2, mismatch repair system component pseudogene 3 | ||
|gene_source=HGNC:9128 | |gene_source=HGNC:9128 | ||
|gene_symbol=PMS2P3 | |gene_symbol=PMS2P3 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_005395 | |nearest_refseq=NM_005395 | ||
|nearest_unigene=Hs.659871 | |nearest_unigene=Hs.659871 | ||
|num_trans= | |num_trans=15 | ||
|species=human | |species=human | ||
|start=75528065 | |start=75528065 | ||
Revision as of 16:13, 18 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 25 |
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| Nearest PromoterID: | NR_028059 |
| Entrez ID: | 5387 |
| Nearest Unigene: | Hs.659871 |
| Nearest Refseq: | NM_005395 |
| Nearest Ensembl: | ENSG00000127957 |
| Gene Name: | PMS1 homolog 2, mismatch repair system component pseudogene 3 |
| Gene Alias: | PMS2L3|PMS2L9|PMS5|PMSR3 |
| Gene Description: | PMS1 homolog 2, mismatch repair system component pseudogene 3 |
| Gene Type: | pseudo |
| CpG%: | 0.105 |
| GC%: | 0.681592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.