TSS: Hg 86162.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000425248.5:0 | |all_trans=ENST00000425248.5:0 NM_012133:0 AF157833:0 AF207598:0 AK291409:0 NM_001290033:-3 HM005552:-3 LF384090:-3 MA619667:-3 ENST00000330992.8:9 BC110796:9 AB047847:46 AK022934:59 BC017443:63 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=14 | ||
|end=130668755 | |end=130668755 | ||
|end_of_center_position=130668735 | |end_of_center_position=130668735 | ||
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|gamma-2-COP= | |gamma-2-COP= | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=2-COP | |gene_alias=2-COP{{!}}gamma-2-COP | ||
|gene_description=coatomer protein complex subunit gamma 2 | |gene_description=coatomer protein complex subunit gamma 2 | ||
|gene_id=26958 | |gene_id=26958 | ||
|gene_name= | |gene_name=COPI coat complex subunit gamma 2 | ||
|gene_source=HGNC:2237 | |gene_source=HGNC:2237 | ||
|gene_symbol=COPG2 | |gene_symbol=COPG2 | ||
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|nearest_refseq=NM_012133 | |nearest_refseq=NM_012133 | ||
|nearest_unigene=Hs.6421 | |nearest_unigene=Hs.6421 | ||
|num_trans= | |num_trans=14 | ||
|species=human | |species=human | ||
|start=130668713 | |start=130668713 | ||
|start_of_center_position=130668734 | |start_of_center_position=130668734 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000425248.5 | |transcript_name=ENST00000425248.5 NM_012133 AF157833 AF207598 AK291409 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_86162.1 | |tss_id=hg_86162.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=Q9UBF2 | |uniprot_id=A0A140VK12 Q9UBF2 | ||
}} | }} | ||
Revision as of 16:55, 18 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 14 |
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| Nearest PromoterID: | NM_012133 |
| Entrez ID: | 26958 |
| Nearest Unigene: | Hs.6421 |
| Nearest Refseq: | NM_012133 |
| Nearest Ensembl: | ENSG00000158623 |
| Gene Name: | COPI coat complex subunit gamma 2 |
| Gene Alias: | 2-COP|gamma-2-COP |
| Gene Description: | coatomer protein complex subunit gamma 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.