TSS: Hg 93429.1: Difference between revisions
From referenceTSS
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|NCRNA00058= | |NCRNA00058= | ||
|U87HG= | |U87HG= | ||
|all_trans=ENST00000520348.5:0 ENST00000521399.5:0 ENST00000521127.1:0 NR_002599:0 | |all_trans=ENST00000520348.5:0 ENST00000521399.5:0 ENST00000521127.1:0 NR_002599:0 NR_152599:0 NR_152598:0 NR_152600:0 AY264285:0 AK057116:0 ENST00000520944.5:-49 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=2 | ||
|end=66925547 | |end=66925547 | ||
|end_of_center_position=66925539 | |end_of_center_position=66925539 | ||
|entrez_id=641638 | |entrez_id=641638 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
|gene_alias=HBII-276HG | |gene_alias=HBII-276HG{{!}}NCRNA00058{{!}}U87HG | ||
|gene_description=small nucleolar RNA host gene 6 | |gene_description=small nucleolar RNA host gene 6 | ||
|gene_id=641638 | |gene_id=641638 | ||
| Line 20: | Line 20: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:32965 | |hgnc_mgi_id=HGNC:32965 | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000245910 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_152600 | ||
|nearest_refseq=NR_002599 | |nearest_refseq=NR_002599 | ||
|nearest_unigene=Hs.372680 | |nearest_unigene=Hs.372680 | ||
|num_trans= | |num_trans=10 | ||
|species=human | |species=human | ||
|start=66925530 | |start=66925530 | ||
|start_of_center_position=66925538 | |start_of_center_position=66925538 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000520348.5 ENST00000521399.5 ENST00000521127.1 NR_002599 | |transcript_name=ENST00000520348.5 ENST00000521399.5 ENST00000521127.1 NR_002599 NR_152599 NR_152598 NR_152600 AY264285 AK057116 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_93429.1 | |tss_id=hg_93429.1 | ||
Revision as of 19:44, 18 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
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| Nearest PromoterID: | NR_152600 |
| Entrez ID: | 641638 |
| Nearest Unigene: | Hs.372680 |
| Nearest Refseq: | NR_002599 |
| Nearest Ensembl: | ENSG00000245910 |
| Gene Name: | small nucleolar RNA host gene 6 |
| Gene Alias: | HBII-276HG|NCRNA00058|U87HG |
| Gene Description: | small nucleolar RNA host gene 6 |
| Gene Type: | ncRNA |
| CpG%: | 0.13 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.