TSS: Mm 1069.1: Difference between revisions
From referenceTSS
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|Als2cr6= | |Als2cr6= | ||
|Alsin= | |Alsin= | ||
|all_trans=NR_168353:-114 | |||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance= | |distance=-114 | ||
|distance_to_tss=-250 | |distance_to_tss=-250 | ||
|end=59237493 | |end=59237493 | ||
| Line 11: | Line 12: | ||
|entrez_id=74018 | |entrez_id=74018 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=3222402C23Rik | |gene_alias=3222402C23Rik{{!}}9430073A21Rik{{!}}Als2cr6{{!}}Alsin{{!}}mKIAA1563 | ||
|gene_description= | |gene_description=alsin Rho guanine nucleotide exchange factor | ||
|gene_name= | |gene_id=102636662 | ||
|gene_name=predicted gene, 33667 | |||
|gene_source=MGI:5592826 | |||
|gene_symbol=Gm33667 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:5592826 | |||
|mKIAA1563= | |mKIAA1563= | ||
|nearest_ensembl=ENSMUSG00000026024 | |nearest_ensembl=ENSMUSG00000026024 | ||
| Line 20: | Line 26: | ||
|nearest_refseq=NM_028717 | |nearest_refseq=NM_028717 | ||
|nearest_unigene=Mm.272078 | |nearest_unigene=Mm.272078 | ||
|num_trans= | |num_trans=1 | ||
|species=mouse | |species=mouse | ||
|start=59237468 | |start=59237468 | ||
|start_of_center_position=59237480 | |start_of_center_position=59237480 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=NR_168353 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_1069.1 | |tss_id=mm_1069.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Revision as of 18:49, 19 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -250 |
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| Nearest PromoterID: | NM_146109 |
| Entrez ID: | 74018 |
| Nearest Unigene: | Mm.272078 |
| Nearest Refseq: | NM_028717 |
| Nearest Ensembl: | ENSMUSG00000026024 |
| Gene Name: | predicted gene, 33667 |
| Gene Alias: | 3222402C23Rik|9430073A21Rik|Als2cr6|Alsin|mKIAA1563 |
| Gene Description: | alsin Rho guanine nucleotide exchange factor |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.