TSS: Mm 117389.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=LF237165:1 MA472742:1 ENSMUST00000223470.2:-19 NR_045293:-19 AK131952:-19 LF199624:-20 MA435201:-20 LF237164:63 MA472741:63 AK085605:396 LF237163:420 MA472740:420 | ||
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance= | |distance=1 | ||
|distance_to_tss=31 | |distance_to_tss=31 | ||
|end=73347365 | |end=73347365 | ||
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|entrez_id=432777 | |entrez_id=432777 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
|gene_alias=AU019512 | |gene_alias=AU019512{{!}}D630045M09Rik | ||
|gene_description= | |gene_description=ephemeron, early developmental lncRNA | ||
|gene_id=432777 | |gene_id=432777 | ||
|gene_name= | |gene_name=Eprn | ||
|gene_source=MGI:3583897 | |gene_source=MGI:3583897 | ||
|gene_symbol=D630045M09Rik | |gene_symbol=D630045M09Rik | ||
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|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:3583897 | |hgnc_mgi_id=MGI:3583897 | ||
|nearest_ensembl= | |nearest_ensembl=ENSMUSG00000113346 | ||
|nearest_promoter_id=NR_045293 | |nearest_promoter_id=NR_045293 | ||
|nearest_refseq=NR_045293 | |nearest_refseq=NR_045293 | ||
|nearest_unigene=Mm.415319 | |nearest_unigene=Mm.415319 | ||
|num_trans= | |num_trans=12 | ||
|species=mouse | |species=mouse | ||
|start=73347340 | |start=73347340 | ||
|start_of_center_position=73347352 | |start_of_center_position=73347352 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF237165 MA472742 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_117389.1 | |tss_id=mm_117389.1 | ||
Latest revision as of 22:53, 19 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 31 |
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| Nearest PromoterID: | NR_045293 |
| Entrez ID: | 432777 |
| Nearest Unigene: | Mm.415319 |
| Nearest Refseq: | NR_045293 |
| Nearest Ensembl: | ENSMUSG00000113346 |
| Gene Name: | Eprn |
| Gene Alias: | AU019512|D630045M09Rik |
| Gene Description: | ephemeron, early developmental lncRNA |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.