TSS: Mm 132458.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans=ENSMUST00000079184. | |all_trans=ENSMUST00000079184.5:0 NM_173869:0 AK050597:0 BC117052:0 BC119354:0 AY163161:22 | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_173869 | |nearest_refseq=NM_173869 | ||
|nearest_unigene=Mm.187847 | |nearest_unigene=Mm.187847 | ||
|num_trans= | |num_trans=6 | ||
|species=mouse | |species=mouse | ||
|start=36156801 | |start=36156801 | ||
|start_of_center_position=36156807 | |start_of_center_position=36156807 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box=-31(CCTTTAAAACCC,+,0.00) | ||
|transcript_name=ENSMUST00000079184. | |transcript_name=ENSMUST00000079184.5 NM_173869 AK050597 BC117052 BC119354 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_132458.1 | |tss_id=mm_132458.1 | ||
Revision as of 04:48, 20 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_173869 |
| Entrez ID: | 268885 |
| Nearest Unigene: | Mm.187847 |
| Nearest Refseq: | NM_173869 |
| Nearest Ensembl: | ENSMUSG00000059657 |
| Gene Name: | stefin A2 like 1 |
| Gene Alias: | - |
| Gene Description: | stefin A2 like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -31(CCTTTAAAACCC,+,0.00) |
TSS expression
Expression data not found.