TSS: Mm 151144.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|R75380= | |R75380= | ||
|all_trans=NR_166769:0 ENSMUST00000236104.1:-15 | |||
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |distance=0 | ||
|distance_to_tss=-11740 | |distance_to_tss=-11740 | ||
|end=53128708 | |end=53128708 | ||
| Line 9: | Line 10: | ||
|entrez_id=27360 | |entrez_id=27360 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias=AI463285 | |gene_alias=AI463285{{!}}R75380 | ||
|gene_description=adducin 3 (gamma) | |gene_description=adducin 3 (gamma) | ||
|gene_name= | |gene_id=102632253 | ||
|gene_name=predicted gene, 30381 | |||
|gene_source=MGI:5589540 | |||
|gene_symbol=Gm30381 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:5589540 | |||
|nearest_ensembl=ENSMUSG00000025026 | |nearest_ensembl=ENSMUSG00000025026 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001164101 | ||
|nearest_refseq=NM_013758 | |nearest_refseq=NM_013758 | ||
|nearest_unigene=Mm.426080 | |nearest_unigene=Mm.426080 | ||
|num_trans= | |num_trans=2 | ||
|species=mouse | |species=mouse | ||
|start=53128698 | |start=53128698 | ||
|start_of_center_position=53128703 | |start_of_center_position=53128703 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=NR_166769 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_151144.1 | |tss_id=mm_151144.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Revision as of 12:02, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -11740 |
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| Nearest PromoterID: | NM_001164101 |
| Entrez ID: | 27360 |
| Nearest Unigene: | Mm.426080 |
| Nearest Refseq: | NM_013758 |
| Nearest Ensembl: | ENSMUSG00000025026 |
| Gene Name: | predicted gene, 30381 |
| Gene Alias: | AI463285|R75380 |
| Gene Description: | adducin 3 (gamma) |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.