TSS: Mm 157764.1: Difference between revisions
From referenceTSS
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|CTR5= | |CTR5= | ||
|Creat= | |Creat= | ||
|all_trans=NR_166886:-16 | |||
|chr=chrX | |chr=chrX | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance= | |distance=-16 | ||
|distance_to_tss=-105 | |distance_to_tss=-105 | ||
|end=73673035 | |end=73673035 | ||
| Line 13: | Line 14: | ||
|entrez_id=102857 | |entrez_id=102857 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
|gene_alias=AA589632 | |gene_alias=AA589632{{!}}CRT{{!}}CRTR{{!}}CT1{{!}}CTR5{{!}}Creat | ||
|gene_description= | |gene_description=solute carrier family 6 (neurotransmitter transporter, creatine), member 8 | ||
|gene_name= | |gene_id=102634755 | ||
|gene_name=predicted gene, 32261 | |||
|gene_source=MGI:5591420 | |||
|gene_symbol=Gm32261 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:5591420 | |||
|nearest_ensembl=ENSMUSG00000019558 | |nearest_ensembl=ENSMUSG00000019558 | ||
|nearest_promoter_id=NM_001142810 | |nearest_promoter_id=NM_001142810 | ||
|nearest_refseq=NM_133987 | |nearest_refseq=NM_133987 | ||
|nearest_unigene=Mm.274553 | |nearest_unigene=Mm.274553 | ||
|num_trans= | |num_trans=1 | ||
|species=mouse | |species=mouse | ||
|start=73673021 | |start=73673021 | ||
|start_of_center_position=73673028 | |start_of_center_position=73673028 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=NR_166886 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_157764.1 | |tss_id=mm_157764.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Revision as of 14:36, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -105 |
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| Nearest PromoterID: | NM_001142810 |
| Entrez ID: | 102857 |
| Nearest Unigene: | Mm.274553 |
| Nearest Refseq: | NM_133987 |
| Nearest Ensembl: | ENSMUSG00000019558 |
| Gene Name: | predicted gene, 32261 |
| Gene Alias: | AA589632|CRT|CRTR|CT1|CTR5|Creat |
| Gene Description: | solute carrier family 6 (neurotransmitter transporter, creatine), member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.