TSS: Mm 159704.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NM_008314 | |all_trans=NM_008314:109 ENSMUST00000036227.6:311 AK141636:311 BC115911:417 BC116654:417 | ||
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_008314 | |nearest_refseq=NM_008314 | ||
|nearest_unigene=Mm.4835 | |nearest_unigene=Mm.4835 | ||
|num_trans= | |num_trans=5 | ||
|species=mouse | |species=mouse | ||
|start=27841837 | |start=27841837 | ||
|start_of_center_position=27841837 | |start_of_center_position=27841837 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_008314 | |transcript_name=NM_008314 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_159704.1 | |tss_id=mm_159704.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=Q3UVG4 | ||
}} | }} | ||
Revision as of 15:21, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -109 |
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| Nearest PromoterID: | NM_008314 |
| Entrez ID: | 15563 |
| Nearest Unigene: | Mm.4835 |
| Nearest Refseq: | NM_008314 |
| Nearest Ensembl: | ENSMUSG00000039106 |
| Gene Name: | 5-hydroxytryptamine (serotonin) receptor 5A |
| Gene Alias: | Htr5 |
| Gene Description: | 5-hydroxytryptamine (serotonin) receptor 5A |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.