TSS: Mm 159852.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENSMUST00000031723.13:-182 ENSMUST00000111039.2:-182 NM_007942:-182 NM_001312875:-182 BC119265:-182 BC119271:-182 BC144883:-182 BC144887:-182 | |all_trans=MS946743:-111 MB462108:-111 ENSMUST00000031723.13:-182 ENSMUST00000111039.2:-182 NM_007942:-182 NM_001312875:-182 BC119265:-182 BC119271:-182 BC144883:-182 BC144887:-182 | ||
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=- | |distance=-111 | ||
|distance_to_tss=182 | |distance_to_tss=182 | ||
|end=137485634 | |end=137485634 | ||
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|gene_description=erythropoietin | |gene_description=erythropoietin | ||
|gene_id=13856 | |gene_id=13856 | ||
|gene_name= | |gene_name=Epo | ||
|gene_source=MGI:95407 | |gene_source=MGI:95407 | ||
|gene_symbol=Epo | |gene_symbol=Epo | ||
| Line 27: | Line 27: | ||
|start_of_center_position=137485633 | |start_of_center_position=137485633 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=MS946743 MB462108 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_159852.1 | |tss_id=mm_159852.1 | ||
Latest revision as of 15:24, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 182 |
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| Nearest PromoterID: | NM_007942 |
| Entrez ID: | 13856 |
| Nearest Unigene: | Mm.349116 |
| Nearest Refseq: | NM_007942 |
| Nearest Ensembl: | ENSMUSG00000029711 |
| Gene Name: | Epo |
| Gene Alias: | - |
| Gene Description: | erythropoietin |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.