TSS: Mm 160753.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=NM_199062: | |all_trans=ENSMUST00000219864.1:0 NM_199062:-13 NM_001368187:-13 NM_001384187:-13 NM_001376985:-13 NM_001346707:-13 ENSMUST00000218939.1:19 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance= | |distance=0 | ||
|distance_to_tss=13 | |distance_to_tss=13 | ||
|end=81771161 | |end=81771161 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=predicted gene 3055 | |gene_description=predicted gene 3055 | ||
|gene_id= | |gene_id=100040944 | ||
|gene_name= | |gene_name=predicted gene 3055 | ||
|gene_source=MGI: | |gene_source=MGI:3809197 | ||
|gene_symbol= | |gene_symbol=Gm3055 | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI: | |hgnc_mgi_id=MGI:3809197 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NM_001346707 | |nearest_promoter_id=NM_001346707 | ||
|nearest_refseq=NM_001346707 | |nearest_refseq=NM_001346707 | ||
|nearest_unigene= | |nearest_unigene= | ||
|num_trans= | |num_trans=7 | ||
|species=mouse | |species=mouse | ||
|start=81771160 | |start=81771160 | ||
|start_of_center_position=81771160 | |start_of_center_position=81771160 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENSMUST00000219864.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_160753.1 | |tss_id=mm_160753.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=A0A1W2P707 | ||
}} | }} | ||
Revision as of 15:44, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 13 |
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| Nearest PromoterID: | NM_001346707 |
| Entrez ID: | 100040944 |
| Nearest Unigene: | |
| Nearest Refseq: | NM_001346707 |
| Nearest Ensembl: | |
| Gene Name: | predicted gene 3055 |
| Gene Alias: | - |
| Gene Description: | predicted gene 3055 |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.