TSS: Mm 161849.1: Difference between revisions

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Line 2: Line 2:
|G630054C21Rik=
|G630054C21Rik=
|Gm95=
|Gm95=
|all_trans=AK090336:11 ENSMUST00000118525.7:-29 ENSMUST00000142066.1:-38 NM_001190371:-38 uc008ecd.2:-38 ENSMUST00000122408.7:44
|all_trans=AK090336:11 ENSMUST00000234183.1:-20 ENSMUST00000142066.1:-38 NM_001190371:-38 NM_001360803:-38 ENSMUST00000122408.7:44 ENSMUST00000118525.8:-115
|chr=chr18
|chr=chr18
|cpg_percent=0.155
|cpg_percent=0.155
Line 11: Line 11:
|entrez_id=225187
|entrez_id=225187
|gc_percent=0.791045
|gc_percent=0.791045
|gene_alias=G630054C21
|gene_alias=G630054C21{{!}}G630054C21Rik{{!}}Gm95
|gene_description=ankyrin repeat domain 29
|gene_description=ankyrin repeat domain 29
|gene_id=225187
|gene_id=225187
Line 21: Line 21:
|hgnc_mgi_id=MGI:2687055
|hgnc_mgi_id=MGI:2687055
|nearest_ensembl=ENSMUSG00000057766
|nearest_ensembl=ENSMUSG00000057766
|nearest_promoter_id=NM_001190371
|nearest_promoter_id=NM_001360803
|nearest_refseq=NM_001190371
|nearest_refseq=NM_001190371
|nearest_unigene=Mm.53865
|nearest_unigene=Mm.53865
|num_trans=6
|num_trans=7
|species=mouse
|species=mouse
|start=12305681
|start=12305681

Revision as of 16:08, 20 June 2021

Basic information about the TSS


TSS ID:mm_161849.1
Species:mouse
Chr:chr18
Start:12305681
End:12305682
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:AK090336
Distance:11
GeneID:225187
HGNC/MGI_ID:MGI:2687055
UniProt_ID:
Gene_name:ankyrin repeat domain 29
Gene_symbol:Ankrd29
Gene_synonyms:G630054C21Rik
Gene_source:MGI:2687055



TATA-Box annotation


Distance to TSS:38
Nearest PromoterID:NM_001360803
Entrez ID:225187
Nearest Unigene:Mm.53865
Nearest Refseq:NM_001190371
Nearest Ensembl:ENSMUSG00000057766
Gene Name:ankyrin repeat domain 29
Gene Alias:G630054C21|G630054C21Rik|Gm95
Gene Description:ankyrin repeat domain 29
Gene Type:protein-coding
CpG%:0.155
GC%:0.791045
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.