TSS: Mm 162641.1: Difference between revisions
From referenceTSS
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| Line 3: | Line 3: | ||
|L2dtl= | |L2dtl= | ||
|Ramp= | |Ramp= | ||
|all_trans=ENSMUST00000192556.1:-314 AK020458:-314 | |all_trans=LF220759:227 MA456336:227 ENSMUST00000192556.1:-314 AK020458:-314 LF193097:-419 MA428674:-419 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |distance=227 | ||
|distance_to_tss=38967 | |distance_to_tss=38967 | ||
|end=191536578 | |end=191536578 | ||
| Line 12: | Line 12: | ||
|entrez_id=76843 | |entrez_id=76843 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
|gene_alias=2810047L02Rik | |gene_alias=2810047L02Rik{{!}}5730564G15Rik{{!}}L2dtl{{!}}Ramp | ||
|gene_description=denticleless E3 ubiquitin protein ligase | |gene_description=denticleless E3 ubiquitin protein ligase | ||
|gene_id=77285 | |gene_id=77285 | ||
|gene_name= | |gene_name=Dtl | ||
|gene_source=MGI:1924535 | |gene_source=MGI:1924535 | ||
|gene_symbol=9430037O13Rik | |gene_symbol=9430037O13Rik | ||
| Line 22: | Line 22: | ||
|hgnc_mgi_id=MGI:1924535 | |hgnc_mgi_id=MGI:1924535 | ||
|nearest_ensembl=ENSMUSG00000037474 | |nearest_ensembl=ENSMUSG00000037474 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_029766 | ||
|nearest_refseq=NM_029766 | |nearest_refseq=NM_029766 | ||
|nearest_unigene=Mm.189102 | |nearest_unigene=Mm.189102 | ||
|num_trans= | |num_trans=6 | ||
|species=mouse | |species=mouse | ||
|start=191536575 | |start=191536575 | ||
|start_of_center_position=191536576 | |start_of_center_position=191536576 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=LF220759 MA456336 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_162641.1 | |tss_id=mm_162641.1 | ||
Latest revision as of 16:27, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 38967 |
|---|---|
| Nearest PromoterID: | NM_029766 |
| Entrez ID: | 76843 |
| Nearest Unigene: | Mm.189102 |
| Nearest Refseq: | NM_029766 |
| Nearest Ensembl: | ENSMUSG00000037474 |
| Gene Name: | Dtl |
| Gene Alias: | 2810047L02Rik|5730564G15Rik|L2dtl|Ramp |
| Gene Description: | denticleless E3 ubiquitin protein ligase |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.