TSS: Mm 163641.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=BC048555:4 ENSMUST00000222701.1:-7 ENSMUST00000222847.1:-7 ENSMUST00000221961.1:-16 AK006455:35 | ||
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
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|gene_alias=- | |gene_alias=- | ||
|gene_description=cDNA sequence BC052688 | |gene_description=cDNA sequence BC052688 | ||
|gene_id= | |gene_id=70002 | ||
|gene_name=RIKEN cDNA 1700028E11 gene | |gene_name=RIKEN cDNA 1700028E11 gene | ||
|gene_source=MGI:1917252 | |gene_source=MGI:1917252 | ||
|gene_symbol=1700028E11Rik | |gene_symbol=1700028E11Rik | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=pseudo | |gene_type=pseudo | ||
|hgnc_mgi_id=MGI:1917252 | |hgnc_mgi_id=MGI:1917252 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_028430 | |nearest_promoter_id=NR_028430 | ||
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|start_of_center_position=61804290 | |start_of_center_position=61804290 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=BC048555 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_163641.1 | |tss_id=mm_163641.1 | ||
Revision as of 16:49, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 32710 |
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| Nearest PromoterID: | NR_028430 |
| Entrez ID: | 432812 |
| Nearest Unigene: | Mm.317358 |
| Nearest Refseq: | NR_028430 |
| Nearest Ensembl: | |
| Gene Name: | RIKEN cDNA 1700028E11 gene |
| Gene Alias: | - |
| Gene Description: | cDNA sequence BC052688 |
| Gene Type: | pseudo |
| CpG%: | 0.03 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.