TSS: Mm 16491.1: Difference between revisions
From referenceTSS
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|EBN1= | |EBN1= | ||
|ENFL1= | |ENFL1= | ||
|all_trans=AK006759:-9 ENSMUST00000155425.1:-195 BC016112:-195 | |all_trans=AK006759:-9 ENSMUST00000155425.1:-195 BC016112:-195 | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 12: | Line 12: | ||
|entrez_id=11438 | |entrez_id=11438 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=Acra-4 | |gene_alias=Acra-4{{!}}Acra4{{!}}EBN1{{!}}ENFL1 | ||
|gene_description= | |gene_description=cholinergic receptor, nicotinic, alpha polypeptide 4 | ||
|gene_id=73368 | |gene_id=73368 | ||
|gene_name= | |gene_name=collagen, type XX, alpha 1 | ||
|gene_source=MGI:1920618 | |gene_source=MGI:1920618 | ||
|gene_symbol=Col20a1 | |gene_symbol=Col20a1 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_015730 | |nearest_refseq=NM_015730 | ||
|nearest_unigene=Mm.252369 | |nearest_unigene=Mm.252369 | ||
|num_trans= | |num_trans=3 | ||
|species=mouse | |species=mouse | ||
|start=181013434 | |start=181013434 | ||
Revision as of 17:18, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 25737 |
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| Nearest PromoterID: | NM_015730 |
| Entrez ID: | 11438 |
| Nearest Unigene: | Mm.252369 |
| Nearest Refseq: | NM_015730 |
| Nearest Ensembl: | ENSMUSG00000027577 |
| Gene Name: | collagen, type XX, alpha 1 |
| Gene Alias: | Acra-4|Acra4|EBN1|ENFL1 |
| Gene Description: | cholinergic receptor, nicotinic, alpha polypeptide 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.