TSS: Mm 168190.1: Difference between revisions
From referenceTSS
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|D10Ertd645e= | |D10Ertd645e= | ||
|D10Wsu42e= | |D10Wsu42e= | ||
|all_trans= | |all_trans=NM_019553:9 ENSMUST00000045866.8:26 AK145578:26 AK160095:36 AF159131:48 BC059237:49 BC043655:51 AK012125:52 BC060220:57 AK010281:129 | ||
|chr=chr10 | |chr=chr10 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 12: | Line 12: | ||
|entrez_id=56200 | |entrez_id=56200 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=AI255159 | |gene_alias=AI255159{{!}}AL022742{{!}}D10Ertd645e{{!}}D10Wsu42e | ||
|gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 | |gene_description=DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 | ||
|gene_id=56200 | |gene_id=56200 | ||
|gene_name= | |gene_name=DExD box helicase 21 | ||
|gene_source=MGI:1860494 | |gene_source=MGI:1860494 | ||
|gene_symbol=Ddx21 | |gene_symbol=Ddx21 | ||
|gene_synonyms=D10Ertd645e D10Wsu42e RH-II/Gualpha RH_II/Gu | |gene_synonyms=D10Ertd645e D10Wsu42e DEAD_(Asp-Glu-Ala-Asp)_box_polypeptide_21 RH-II/Gualpha RH_II/Gu | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1860494 | |hgnc_mgi_id=MGI:1860494 | ||
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|nearest_refseq=NM_019553 | |nearest_refseq=NM_019553 | ||
|nearest_unigene=Mm.413275 | |nearest_unigene=Mm.413275 | ||
|num_trans= | |num_trans=10 | ||
|species=mouse | |species=mouse | ||
|start=62602306 | |start=62602306 | ||
|start_of_center_position=62602315 | |start_of_center_position=62602315 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=NM_019553 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_168190.1 | |tss_id=mm_168190.1 | ||
Revision as of 18:34, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -18 |
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| Nearest PromoterID: | NM_019553 |
| Entrez ID: | 56200 |
| Nearest Unigene: | Mm.413275 |
| Nearest Refseq: | NM_019553 |
| Nearest Ensembl: | ENSMUSG00000020075 |
| Gene Name: | DExD box helicase 21 |
| Gene Alias: | AI255159|AL022742|D10Ertd645e|D10Wsu42e |
| Gene Description: | DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.