TSS: Mm 28903.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| Line 7: | Line 7: | ||
|PGDH= | |PGDH= | ||
|SERA= | |SERA= | ||
|all_trans=AK076815:0 AK169684:0 AK147946:5 BC110673:12 NM_016966 | |all_trans=AK076815:0 AK169684:0 AK147946:5 BC110673:12 NM_016966:-24 ENSMUST00000065793.11:-45 BC086668:45 BC027566:78 | ||
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| Line 16: | Line 16: | ||
|entrez_id=236539 | |entrez_id=236539 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
|gene_alias=3-PGDH | |gene_alias=3-PGDH{{!}}3PGDH{{!}}4930479N23{{!}}A10{{!}}PGAD{{!}}PGD{{!}}PGDH{{!}}SERA | ||
|gene_description=3-phosphoglycerate dehydrogenase | |gene_description=3-phosphoglycerate dehydrogenase | ||
|gene_id=236539 | |gene_id=236539 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_016966 | |nearest_refseq=NM_016966 | ||
|nearest_unigene=Mm.16898 | |nearest_unigene=Mm.16898 | ||
|num_trans= | |num_trans=8 | ||
|species=mouse | |species=mouse | ||
|start=98339921 | |start=98339921 | ||
Revision as of 00:58, 21 June 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 36 |
|---|---|
| Nearest PromoterID: | NM_016966 |
| Entrez ID: | 236539 |
| Nearest Unigene: | Mm.16898 |
| Nearest Refseq: | NM_016966 |
| Nearest Ensembl: | ENSMUSG00000053398 |
| Gene Name: | 3-phosphoglycerate dehydrogenase |
| Gene Alias: | 3-PGDH|3PGDH|4930479N23|A10|PGAD|PGD|PGDH|SERA |
| Gene Description: | 3-phosphoglycerate dehydrogenase |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.