TSS: Mm 3533.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|Rpr1= | |Rpr1= | ||
|all_trans=ENSMUST00000165062.7:0 ENSMUST00000191228.6:0 ENSMUST00000186572.6:0 ENSMUST00000185698.1:0 NM_001159730:0 NM_024458 | |all_trans=ENSMUST00000165062.7:0 ENSMUST00000191228.6:0 ENSMUST00000186572.6:0 ENSMUST00000185698.1:0 NM_001159730:0 NM_024458:0 AK020798:0 L08075:0 BC021920:0 BC037176:0 BC012507:0 | ||
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
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|entrez_id=20028 | |entrez_id=20028 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
|gene_alias=Rpr-1 | |gene_alias=Rpr-1{{!}}Rpr1 | ||
|gene_description=phosducin | |gene_description=phosducin | ||
|gene_id=20028 | |gene_id=20028 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=MGI:98090 | |hgnc_mgi_id=MGI:98090 | ||
|nearest_ensembl=ENSMUSG00000006007 | |nearest_ensembl=ENSMUSG00000006007 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_024458 | ||
|nearest_refseq=NM_024458 | |nearest_refseq=NM_024458 | ||
|nearest_unigene=Mm.440883 | |nearest_unigene=Mm.440883 | ||
|num_trans= | |num_trans=11 | ||
|species=mouse | |species=mouse | ||
|start=150319407 | |start=150319407 | ||
|start_of_center_position=150319428 | |start_of_center_position=150319428 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000165062.7 ENSMUST00000191228.6 ENSMUST00000186572.6 ENSMUST00000185698.1 NM_001159730 NM_024458 | |transcript_name=ENSMUST00000165062.7 ENSMUST00000191228.6 ENSMUST00000186572.6 ENSMUST00000185698.1 NM_001159730 NM_024458 AK020798 L08075 BC021920 BC037176 BC012507 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_3533.1 | |tss_id=mm_3533.1 | ||
Revision as of 03:28, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 11 |
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| Nearest PromoterID: | NM_024458 |
| Entrez ID: | 20028 |
| Nearest Unigene: | Mm.440883 |
| Nearest Refseq: | NM_024458 |
| Nearest Ensembl: | ENSMUSG00000006007 |
| Gene Name: | phosducin |
| Gene Alias: | Rpr-1|Rpr1 |
| Gene Description: | phosducin |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.