TSS: Mm 37513.1: Difference between revisions
From referenceTSS
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| Line 3: | Line 3: | ||
|AW742590= | |AW742590= | ||
|Amy-1= | |Amy-1= | ||
|all_trans= | |all_trans=AK132422:0 | ||
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 12: | Line 12: | ||
|entrez_id=56309 | |entrez_id=56309 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=5730488M09Rik | |gene_alias=5730488M09Rik{{!}}AW552132{{!}}AW742590{{!}}Amy-1 | ||
|gene_description=MYC binding protein | |gene_description=MYC binding protein | ||
|gene_id=442805 | |gene_id=442805 | ||
|gene_name= | |gene_name=RIKEN cDNA D130007C19 gene | ||
|gene_source=MGI:3045257 | |gene_source=MGI:3045257 | ||
|gene_symbol=D130007C19Rik | |gene_symbol=D130007C19Rik | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3045257 | |hgnc_mgi_id=MGI:3045257 | ||
|nearest_ensembl=ENSMUSG00000028647 | |nearest_ensembl=ENSMUSG00000028647 | ||
|nearest_promoter_id=NM_019660 | |nearest_promoter_id=NM_019660 | ||
|nearest_refseq=NM_019660 | |nearest_refseq=NM_019660 | ||
|nearest_unigene=Mm.446553 | |nearest_unigene=Mm.446553 | ||
|num_trans= | |num_trans=1 | ||
|species=mouse | |species=mouse | ||
|start=123904826 | |start=123904826 | ||
|start_of_center_position=123904835 | |start_of_center_position=123904835 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=AK132422 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_37513.1 | |tss_id=mm_37513.1 | ||
Revision as of 04:19, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -178 |
|---|---|
| Nearest PromoterID: | NM_019660 |
| Entrez ID: | 56309 |
| Nearest Unigene: | Mm.446553 |
| Nearest Refseq: | NM_019660 |
| Nearest Ensembl: | ENSMUSG00000028647 |
| Gene Name: | RIKEN cDNA D130007C19 gene |
| Gene Alias: | 5730488M09Rik|AW552132|AW742590|Amy-1 |
| Gene Description: | MYC binding protein |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.