TSS: Mm 66847.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|Dbx= | |Dbx= | ||
|all_trans=ENSMUST00000032717.6:0 S75837:0 NM_001005232:13 | |all_trans=ENSMUST00000032717.6:0 S75837:0 LF196335:0 MA431912:0 NM_001005232:13 BC082541:13 LF202723:-483 MA438300:-483 | ||
|chr=chr7 | |chr=chr7 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| Line 10: | Line 10: | ||
|entrez_id=13172 | |entrez_id=13172 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
|gene_alias=AI426026 | |gene_alias=AI426026{{!}}Dbx | ||
|gene_description=developing brain homeobox 1 | |gene_description=developing brain homeobox 1 | ||
|gene_id=13172 | |gene_id=13172 | ||
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|nearest_refseq=NM_001005232 | |nearest_refseq=NM_001005232 | ||
|nearest_unigene=Mm.307176 | |nearest_unigene=Mm.307176 | ||
|num_trans= | |num_trans=8 | ||
|species=mouse | |species=mouse | ||
|start=49636847 | |start=49636847 | ||
|start_of_center_position=49636849 | |start_of_center_position=49636849 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000032717.6 S75837 | |transcript_name=ENSMUST00000032717.6 S75837 LF196335 MA431912 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_66847.1 | |tss_id=mm_66847.1 | ||
Revision as of 15:36, 21 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -14 |
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| Nearest PromoterID: | NM_001005232 |
| Entrez ID: | 13172 |
| Nearest Unigene: | Mm.307176 |
| Nearest Refseq: | NM_001005232 |
| Nearest Ensembl: | ENSMUSG00000030507 |
| Gene Name: | developing brain homeobox 1 |
| Gene Alias: | AI426026|Dbx |
| Gene Description: | developing brain homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.